In this 2-week long Harvard FAS informatics nanocourse, I co-taught snakemake for one afternoon and lead-instructed scRNAseq analysis for a full day.

  • The snakemake workshop material was adapted from Titus Brown and can be found at https://github.com/crazyhottommy/2019-snakemake-Harvard-Informatics-nanocourse

  • The scRNAseq workshop material was developed using workflowr and can be …